BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E08LP1|AL429915
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1506 1701 0.0
>3x_Contig1506
Length = 7652
Score = 1701 bits (858), Expect = 0.0
Identities = 894/901 (99%), Gaps = 4/901 (0%)
Strand = Plus / Plus
Query: 1 gatcgtaaacttcttgtggaacaacga-ggattcttctgggttgaaaccgaatttgacct 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3764 gatcgtaaacttcttgtggaacaacgaaggattcttctgggttgaaaccgaatttgacct 3823
Query: 60 tcaattgcttgacatcatcagccttcaatggggcaccgtgaacggagtagtgnaaccagc 119
|||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 3824 tcaattgcttgacatcatcagccttcaatggggcaccgtgaacggagt-gag-aaccagc 3881
Query: 120 attcagagaaccgaaaccgatagtggtggtcaacttgatcaaagttggtctatcagaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3882 attcagagaaccgaaaccgatagtggtggtcaacttgatcaaagttggtctatcagaaag 3941
Query: 180 cttagcttgttccaaagctttactgatagcatccaaatcgtcgttaccgttttcgacgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3942 cttagcttgttccaaagctttactgatagcatccaaatcgtcgttaccgttttcgacgtg 4001
Query: 240 caagacttcccaaccgtag-cttcgtatctcttgctaacgtcttcatcgaaagaaacgtt 298
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4002 caagacttcccaaccgtaggcttcgtatctcttgctaacgtcttcatcgaaagaaacgtt 4061
Query: 299 gatgttaccatcgatggtaatttggttatcatcatagaaggcaatcaagttcttcaacct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4062 gatgttaccatcgatggtaatttggttatcatcatagaaggcaatcaagttcttcaacct 4121
Query: 359 caaatgacctgccaaagaagaggcttcagaagaaacaccttcttgcaaacaaccgtcacc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4122 caaatgacctgccaaagaagaggcttcagaagaaacaccttcttgcaaacaaccgtcacc 4181
Query: 419 caagaaaacgtaagttnaagaatcagacaattcgtaatctggcttgttgtaagtggcagc 478
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4182 caagaaaacgtaagtgtaagaatcagacaattcgtaatctggcttgttgtaagtggcagc 4241
Query: 479 gaagttggcttgagcaatagccataccaacagcgttagagataccttgacccaatggacc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4242 gaagttggcttgagcaatagccataccaacagcgttagagataccttgacccaatggacc 4301
Query: 539 ggtagtaacttcaacacccggcaattcaaattctgggtgaccaggggtcttagaacccag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4302 ggtagtaacttcaacacccggcaattcaaattctgggtgaccaggggtcttagaacccag 4361
Query: 599 atgtctgaaatgcttcaaatcttcgatggacatgtcgtaaccgaacaagtgtaacaaaga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4362 atgtctgaaatgcttcaaatcttcgatggacatgtcgtaaccgaacaagtgtaacaaaga 4421
Query: 659 gtacaacaatgcacaggcatgaccgttggacaagacaaatctgtcacggttgatccattc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4422 gtacaacaatgcacaggcatgaccgttggacaagacaaatctgtcacggttgatccattc 4481
Query: 719 tggattcttaggattcaatctcatttgcttccagatcacatgggcagctggagccaaacc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4482 tggattcttaggattcaatctcatttgcttccagatcacatgggcagctggagccaaacc 4541
Query: 779 caatggggcacctggatgaccagagttggcagcagagacttggtcgactgctaacaatct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4542 caatggggcacctggatgaccagagttggcagcagagacttggtcgactgctaacaatct 4601
Query: 839 gatcgtgctaacggctaaacgatcgatatcagtgtattgagacattgttttcgttgtgta 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4602 gatcgtgctaacggctaaacgatcgatatcagtgtattgagacattgttttcgttgtgta 4661
Query: 899 g 899
|
Sbjct: 4662 g 4662
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5948
Number of Sequences: 1807
Number of extensions: 5948
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)